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Registro Completo |
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Biblioteca(s): |
Embrapa Arroz e Feijão. |
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Data corrente: |
26/09/2017 |
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Data da última atualização: |
26/09/2017 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
PERSEGUINI, J. M. K. C.; OBLESSUC, P. R.; ROSA, J. R. B. F.; GOMES, K. A.; CHIORATO, A. F.; CARBONELL, S. A. M.; GARCIA, A. A. F.; VIANELLO, R. P.; BENCHIMOL-REIS, L. L. |
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Afiliação: |
JULIANA MORINI KÜPPER CARDOSO, IAC; PAULA RODRIGUES OBLESSUC, LABORATÓRIO NACIONAL DE BIOCIÊNCIAS, Campinas-SP; JOÃO RICARDO BACHEGA FEIJÓ ROSA, ESALQ; KLEBER ALVES GOMES, IAC; ALISSON FERNANDO CHIORATO, IAC; SERGIO AUGUSTO MORAIS CARBONELL, IAC; ANTONIO AUGUSTO FRANCO GARCIA, ESALQ; ROSANA PEREIRA VIANELLO, CNPAF; LUCIANA LASRY BENCHIMOL-REIS, IAC. |
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Título: |
Genome-wide association studies of anthracnose and angular leaf spot resistance in common bean (Phaseolus vulgaris L.). |
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Ano de publicação: |
2016 |
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Fonte/Imprenta: |
Plos One, v. 11, n. 3, e0150506, Mar. 2016. |
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DOI: |
10.1371/journal.pone.0150506 |
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Idioma: |
Inglês |
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Conteúdo: |
The common bean (Phaseolus vulgaris L.) is the world?s most important legume for human consumption. Anthracnose (ANT; Colletotrichum lindemuthianum) and angular leaf spot (ALS; Pseudocercospora griseola) are complex diseases that cause major yield losses in common bean. Depending on the cultivar and environmental conditions, anthracnose and angular leaf spot infections can reduce crop yield drastically. This study aimed to estimate linkage disequilibrium levels and identify quantitative resistance loci (QRL) controlling resistance to both ANT and ALS diseases of 180 accessions of common bean using genomewide association analysis. A randomized complete block design with four replicates was performed for the ANT and ALS experiments, with four plants per genotype in each replicate. Association mapping analyses were performed for ANT and ALS using a mixed linear model approach implemented in TASSEL. A total of 17 and 11 significant statistically associations involving SSRs were detected for ANT and ALS resistance loci, respectively. Using SNPs, 21 and 17 significant statistically associations were obtained for ANT and angular ALS, respectively, providing more associations with this marker. The SSR-IAC167 and PvM95 markers, both located on chromosome Pv03, and the SNP scaffold00021_89379, were associated with both diseases. The other markers were distributed across the entire common bean genome, with chromosomes Pv03 and Pv08 showing the greatest number of loci associated with ANT resistance. The chromosome Pv04 was the most saturated one, with six markers associated with ALS resistance. The telomeric region of this chromosome showed four markers located between approximately 2.5 Mb and 4.4 Mb. Our results demonstrate the great potential of genome-wide association studies to identify QRLs related to ANT and ALS in common bean. The results indicate a quantitative and complex inheritance pattern for both diseases in common bean. Our findings will contribute to more effective screening of elite germplasm to find resistance alleles for marker-assisted selection in breeding programs. MenosThe common bean (Phaseolus vulgaris L.) is the world?s most important legume for human consumption. Anthracnose (ANT; Colletotrichum lindemuthianum) and angular leaf spot (ALS; Pseudocercospora griseola) are complex diseases that cause major yield losses in common bean. Depending on the cultivar and environmental conditions, anthracnose and angular leaf spot infections can reduce crop yield drastically. This study aimed to estimate linkage disequilibrium levels and identify quantitative resistance loci (QRL) controlling resistance to both ANT and ALS diseases of 180 accessions of common bean using genomewide association analysis. A randomized complete block design with four replicates was performed for the ANT and ALS experiments, with four plants per genotype in each replicate. Association mapping analyses were performed for ANT and ALS using a mixed linear model approach implemented in TASSEL. A total of 17 and 11 significant statistically associations involving SSRs were detected for ANT and ALS resistance loci, respectively. Using SNPs, 21 and 17 significant statistically associations were obtained for ANT and angular ALS, respectively, providing more associations with this marker. The SSR-IAC167 and PvM95 markers, both located on chromosome Pv03, and the SNP scaffold00021_89379, were associated with both diseases. The other markers were distributed across the entire common bean genome, with chromosomes Pv03 and Pv08 showing the greatest number of loci associated with AN... Mostrar Tudo |
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Thesagro: |
Antracnose; Colletotrichum lindemuthianum; Feijão; Genoma; Mancha foliar; Phaseolus vulgaris. |
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Categoria do assunto: |
X Pesquisa, Tecnologia e Engenharia |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/164342/1/CNPAF-2016-plosone.pdf
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Marc: |
LEADER 03030naa a2200301 a 4500
001 2076304
005 2017-09-26
008 2016 bl uuuu u00u1 u #d
024 7 $a10.1371/journal.pone.0150506$2DOI
100 1 $aPERSEGUINI, J. M. K. C.
245 $aGenome-wide association studies of anthracnose and angular leaf spot resistance in common bean (Phaseolus vulgaris L.).$h[electronic resource]
260 $c2016
520 $aThe common bean (Phaseolus vulgaris L.) is the world?s most important legume for human consumption. Anthracnose (ANT; Colletotrichum lindemuthianum) and angular leaf spot (ALS; Pseudocercospora griseola) are complex diseases that cause major yield losses in common bean. Depending on the cultivar and environmental conditions, anthracnose and angular leaf spot infections can reduce crop yield drastically. This study aimed to estimate linkage disequilibrium levels and identify quantitative resistance loci (QRL) controlling resistance to both ANT and ALS diseases of 180 accessions of common bean using genomewide association analysis. A randomized complete block design with four replicates was performed for the ANT and ALS experiments, with four plants per genotype in each replicate. Association mapping analyses were performed for ANT and ALS using a mixed linear model approach implemented in TASSEL. A total of 17 and 11 significant statistically associations involving SSRs were detected for ANT and ALS resistance loci, respectively. Using SNPs, 21 and 17 significant statistically associations were obtained for ANT and angular ALS, respectively, providing more associations with this marker. The SSR-IAC167 and PvM95 markers, both located on chromosome Pv03, and the SNP scaffold00021_89379, were associated with both diseases. The other markers were distributed across the entire common bean genome, with chromosomes Pv03 and Pv08 showing the greatest number of loci associated with ANT resistance. The chromosome Pv04 was the most saturated one, with six markers associated with ALS resistance. The telomeric region of this chromosome showed four markers located between approximately 2.5 Mb and 4.4 Mb. Our results demonstrate the great potential of genome-wide association studies to identify QRLs related to ANT and ALS in common bean. The results indicate a quantitative and complex inheritance pattern for both diseases in common bean. Our findings will contribute to more effective screening of elite germplasm to find resistance alleles for marker-assisted selection in breeding programs.
650 $aAntracnose
650 $aColletotrichum lindemuthianum
650 $aFeijão
650 $aGenoma
650 $aMancha foliar
650 $aPhaseolus vulgaris
700 1 $aOBLESSUC, P. R.
700 1 $aROSA, J. R. B. F.
700 1 $aGOMES, K. A.
700 1 $aCHIORATO, A. F.
700 1 $aCARBONELL, S. A. M.
700 1 $aGARCIA, A. A. F.
700 1 $aVIANELLO, R. P.
700 1 $aBENCHIMOL-REIS, L. L.
773 $tPlos One$gv. 11, n. 3, e0150506, Mar. 2016.
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Registro original: |
Embrapa Arroz e Feijão (CNPAF) |
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Registro |
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Registro Completo
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Biblioteca(s): |
Embrapa Algodão. |
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Data corrente: |
05/07/2010 |
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Data da última atualização: |
30/03/2011 |
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Tipo da produção científica: |
Artigo em Anais de Congresso |
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Autoria: |
GONDIM, T. M. de S.; SOFIATTI, V.; SEVERINO, L. S.; FERREIRA, G. B.; VASCONCELOS, R. A. de; SILVA, F. M. de O.; SILVA, V. N. B.; SILVA, D. M. A. |
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Afiliação: |
TARCISIO MARCOS DE SOUZA GONDIM, CNPA; VALDINEI SOFIATTI, CNPA; LIV SOARES SEVERINO, CNPA; Gilvan Barbosa Ferreria; RAMON ARAUJO DE VASCONCELOS, CNPA; Franklin Magnum De Oliveira Silva; Vivianny Nayse Belo Silva; Dalva Maria Almeida Silva. |
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Título: |
Adubação do híbrido de mamoneira "savana" em cultivo de sequeiro. |
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Ano de publicação: |
2010 |
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Fonte/Imprenta: |
In: CONGRESSO BRASILEIRO DE MAMONA, 4.; SIMPÓSIO INTERNACIONAL DE OLEAGINOSAS ENERGÉTICAS, 1., 2010, João Pessoa. Inclusão social e energia: anais. Campina Grande: Embrapa Algodão, 2010. |
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ISSN: |
2177-6008 |
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Idioma: |
Português |
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Palavras-Chave: |
Adubação química; Crescimento da mamoneira; Nutrição de plantas. |
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Thesagro: |
Mamona; Ricinus Communis. |
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Categoria do assunto: |
-- |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/18463/1/FER-33.pdf
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Marc: |
LEADER 00877nam a2200253 a 4500
001 1856780
005 2011-03-30
008 2010 bl uuuu u00u1 u #d
022 $a2177-6008
100 1 $aGONDIM, T. M. de S.
245 $aAdubação do híbrido de mamoneira "savana" em cultivo de sequeiro.
260 $aIn: CONGRESSO BRASILEIRO DE MAMONA, 4.; SIMPÓSIO INTERNACIONAL DE OLEAGINOSAS ENERGÉTICAS, 1., 2010, João Pessoa. Inclusão social e energia: anais. Campina Grande: Embrapa Algodão$c2010
650 $aMamona
650 $aRicinus Communis
653 $aAdubação química
653 $aCrescimento da mamoneira
653 $aNutrição de plantas
700 1 $aSOFIATTI, V.
700 1 $aSEVERINO, L. S.
700 1 $aFERREIRA, G. B.
700 1 $aVASCONCELOS, R. A. de
700 1 $aSILVA, F. M. de O.
700 1 $aSILVA, V. N. B.
700 1 $aSILVA, D. M. A.
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Registro original: |
Embrapa Algodão (CNPA) |
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